EnhancerDB
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  3. rs549951729[chr16:85248834]
Enhancers that have rs549951729[chr16:85248834]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549951729[chr16:85248834]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85248672 85250583 ZNF143 GTRD no Epithelial (MCF-7) 21721352
chr16 85248684 85250600 TCF7L2 GTRD no Colon (HCT116) 21721353
chr16 85248832 85248844 PKNOX2 JASPAR yes 12033684
Genes associated with rs549951729[chr16:85248834], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More