EnhancerDB
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  3. rs549954928[chr19:778644]
Enhancers that have rs549954928[chr19:778644]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 774584 785655 enh17836
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Stomach
Transcript factors that have rs549954928[chr19:778644]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 778471 779873 TEF1 GTRD no Bone (Osteoblast) 108346353
chr19 778611 779605 ZNF274 GTRD no Liver (HepG2) 21829795
chr19 778611 779605 ZNF274 GTRD no Liver (HepG2) 108346354
chr19 778611 779610 ZBTB33 GTRD no Lung (A549) 108346355
chr19 778611 779737 P63 GTRD no Skin (Keratinocyte) 21829796
chr19 778611 779737 P63 GTRD no Skin (Keratinocyte) 108346356
chr19 778617 779866 ZBTB33 GTRD no Lung (A549) 108346357
chr19 778628 779826 P63 GTRD no Skin (Keratinocyte) 21829797
chr19 778628 779826 P63 GTRD no Skin (Keratinocyte) 108346358
chr19 778633 779764 ZBTB33 GTRD no Lung (A549) 108346359
chr19 778634 778649 MEF2C JASPAR yes 111976021
chr19 778642 778656 POU4F1 JASPAR yes 111976022
chr19 778642 778658 POU4F2 JASPAR yes 111976023
chr19 778642 778658 POU4F3 JASPAR yes 111976024
chr19 778643 779732 P63 GTRD no Skin (Keratinocyte) 21829798
chr19 778643 779732 P63 GTRD no Skin (Keratinocyte) 108346360
chr19 778644 778655 CDX2 JASPAR yes 111976025
Genes associated with rs549954928[chr19:778644], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More