EnhancerDB
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  3. rs549978727[chr16:3921130]
Enhancers that have rs549978727[chr16:3921130]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs549978727[chr16:3921130]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3921112 3921133 IRF1 JASPAR yes 9237893
chr16 3921114 3921135 ZNF263 JASPAR yes 9237894
chr16 3921115 3921136 ZNF263 JASPAR yes 9237895
chr16 3921116 3921130 STAT1 JASPAR yes 9237896
chr16 3921116 3921131 PRDM1 JASPAR yes 9237897
chr16 3921116 3921131 STAT2 JASPAR yes 9237898
chr16 3921121 3921142 IRF1 JASPAR yes 9237899
chr16 3921122 3921137 FOXP1 JASPAR yes 9237900
chr16 3921125 3921139 STAT1 JASPAR yes 9237901
chr16 3921125 3921140 STAT2 JASPAR yes 9237902
Genes associated with rs549978727[chr16:3921130], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More