EnhancerDB
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  3. rs550017838[chr12:65999534]
Enhancers that have rs550017838[chr12:65999534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65985125 66011195 enh47591
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550017838[chr12:65999534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65996923 66000321 ZBTB33 GTRD no Brain (SK-N-SH) 108042117
chr12 65997749 66000262 ZBTB33 GTRD no Brain (SK-N-SH) 108042131
chr12 65999150 65999966 P63 GTRD no Skin (Keratinocyte) 21553154
chr12 65999251 66000232 P63 GTRD no Skin (Keratinocyte) 21553155
chr12 65999337 66000046 P63 GTRD no Skin (Keratinocyte) 21553156
chr12 65999531 65999546 MEF2C JASPAR yes 121474749
chr12 65999532 65999547 MEF2A JASPAR yes 121474750
chr12 65999533 65999545 MEF2A JASPAR yes 121474751
chr12 65999533 65999545 MEF2B JASPAR yes 121474752
chr12 65999533 65999545 MEF2D JASPAR yes 121474753
chr12 65999534 65999544 MEF2A JASPAR yes 121474754
Genes associated with rs550017838[chr12:65999534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More