EnhancerDB
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  3. rs550028617[chr1:218667822]
Enhancers that have rs550028617[chr1:218667822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218644305 218676855 enh12672
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs550028617[chr1:218667822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218667508 218668178 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870438
chr1 218667708 218668198 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870439
chr1 218667754 218668334 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870440
chr1 218667762 218668138 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870441
chr1 218667819 218668149 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870442
chr1 218667821 218668001 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107870443
Genes associated with rs550028617[chr1:218667822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More