EnhancerDB
  1. Home
  2. SNP
  3. rs550034349[chr17:57827663]
Enhancers that have rs550034349[chr17:57827663]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550034349[chr17:57827663]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57827651 57827667 SOX8 JASPAR yes 55076801
chr17 57827654 57827668 POU4F1 JASPAR yes 55076802
chr17 57827655 57827669 POU4F1 JASPAR yes 55076803
chr17 57827657 57827678 IRF1 JASPAR yes 55076804
chr17 57827658 57827679 IRF1 JASPAR yes 55076805
chr17 57827662 57827677 FOXP1 JASPAR yes 55076806
chr17 57827663 57827678 FOXP1 JASPAR yes 55076807
Genes associated with rs550034349[chr17:57827663], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More