EnhancerDB
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  3. rs550048998[chr1:235152353]
Enhancers that have rs550048998[chr1:235152353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs550048998[chr1:235152353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235152019 235152616 ZNF274 GTRD no Liver (HepG2) 21403158
chr1 235152019 235152616 ZNF274 GTRD no Liver (HepG2) 107885639
chr1 235152038 235152739 ZNF274 GTRD no Bone Marrow (K562) 21403159
chr1 235152057 235152668 ZNF274 GTRD no Liver (HepG2) 21403160
chr1 235152109 235152735 ZNF274 GTRD no Liver (HepG2) 21403161
Genes associated with rs550048998[chr1:235152353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More