EnhancerDB
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  3. rs550081552[chr1:173391356]
Enhancers that have rs550081552[chr1:173391356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs550081552[chr1:173391356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173391355 173391359 H1TF2 TRANSFAC yes 33198345
chr1 173391355 173391359 NFE TRANSFAC yes 33198346
chr1 173391355 173391359 SRF TRANSFAC yes 33198347
Genes associated with rs550081552[chr1:173391356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More