EnhancerDB
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  3. rs550099368[chr19:2617959]
Enhancers that have rs550099368[chr19:2617959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550099368[chr19:2617959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 21837652
chr19 2616581 2618471 ZNF274 GTRD no Blood (GM12878) 108363219
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 21837655
chr19 2616618 2619986 ZNF274 GTRD no Blood (GM12878) 108363222
chr19 2617951 2617969 RARA JASPAR yes 112083913
chr19 2617957 2617968 E2F6 JASPAR yes 112083914
Genes associated with rs550099368[chr19:2617959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More