EnhancerDB
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  3. rs550106050[chr12:65998888]
Enhancers that have rs550106050[chr12:65998888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65985125 66011195 enh47591
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550106050[chr12:65998888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65996923 66000321 ZBTB33 GTRD no Brain (SK-N-SH) 108042117
chr12 65997749 66000262 ZBTB33 GTRD no Brain (SK-N-SH) 108042131
chr12 65997909 65998994 ZBTB33 GTRD no Brain (SK-N-SH) 108042138
chr12 65997927 65999129 ZBTB33 GTRD no Brain (SK-N-SH) 108042140
chr12 65998878 65998893 HNF1A JASPAR yes 121474650
chr12 65998879 65998892 HNF1B JASPAR yes 121474651
chr12 65998882 65998894 PBX1 JASPAR yes 121474653
chr12 65998883 65998896 DUXA JASPAR yes 121474654
chr12 65998884 65998894 PAX3 JASPAR yes 121474655
chr12 65998884 65998894 PAX7 JASPAR yes 121474656
chr12 65998884 65998895 DUX4 JASPAR yes 121474657
Genes associated with rs550106050[chr12:65998888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More