EnhancerDB
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  3. rs550109794[chr2:37885567]
Enhancers that have rs550109794[chr2:37885567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37873616 37895683 enh5417
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
chr2 37885188 37885619 vista31041
VISTA
Transcript factors that have rs550109794[chr2:37885567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37885559 37885568 SOX9 JASPAR yes 22034670
chr2 37885559 37885568 SOX9 JASPAR yes 73071914
chr2 37885567 37885572 NFY TRANSFAC yes 22034671
chr2 37885567 37885572 NFY TRANSFAC yes 73071915
chr2 37885567 37885588 IRF1 JASPAR yes 22034672
chr2 37885567 37885588 IRF1 JASPAR yes 73071916
Genes associated with rs550109794[chr2:37885567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More