EnhancerDB
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  3. rs550114655[chr1:173388482]
Enhancers that have rs550114655[chr1:173388482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs550114655[chr1:173388482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173388203 173388879 TEF1 GTRD no Bone (Osteoblast) 21351298
chr1 173388321 173388793 ZNF274 GTRD no Bone Marrow (K562) 21351299
chr1 173388336 173388765 ZNF274 GTRD no Bone Marrow (K562) 21351300
chr1 173388388 173388682 ZNF274 GTRD no Bone Marrow (K562) 21351301
chr1 173388417 173388759 ZNF274 GTRD no Liver (HepG2) 21351302
chr1 173388421 173388651 ZNF143 GTRD no Epithelial (MCF-7) 21351303
chr1 173388439 173388716 ZNF274 GTRD no Cervix (HeLa-S3) 21351304
chr1 173388479 173388494 FOXP1 JASPAR yes 33197810
chr1 173388480 173388495 FOXP1 JASPAR yes 33197811
chr1 173388480 173388501 IRF1 JASPAR yes 33197812
chr1 173388481 173388496 FOXP1 JASPAR yes 33197813
chr1 173388481 173388502 IRF1 JASPAR yes 33197814
chr1 173388482 173388497 FOXP1 JASPAR yes 33197815
chr1 173388482 173388503 IRF1 JASPAR yes 33197816
Genes associated with rs550114655[chr1:173388482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More