EnhancerDB
  1. Home
  2. SNP
  3. rs550119504[chr1:25085306]
Enhancers that have rs550119504[chr1:25085306]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550119504[chr1:25085306]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25085289 25085310 IRF1 JASPAR yes 27527541
chr1 25085294 25085309 MEF2A JASPAR yes 27527549
chr1 25085295 25085310 FOXP1 JASPAR yes 27527550
chr1 25085295 25085310 MEF2C JASPAR yes 27527551
chr1 25085295 25085316 IRF1 JASPAR yes 27527552
chr1 25085296 25085308 FOXC2 JASPAR yes 27527553
chr1 25085296 25085308 MEF2A JASPAR yes 27527554
chr1 25085296 25085308 MEF2B JASPAR yes 27527555
chr1 25085296 25085308 MEF2D JASPAR yes 27527556
chr1 25085297 25085307 MEF2A JASPAR yes 27527557
chr1 25085299 25085311 IRF1 JASPAR yes 27527559
chr1 25085299 25085313 IRF7 JASPAR yes 27527560
chr1 25085301 25085316 FOXP1 JASPAR yes 27527561
chr1 25085302 25085314 FOXC2 JASPAR yes 27527562
chr1 25085303 25085314 FOXC1 JASPAR yes 27527563
chr1 25085303 25085324 IRF1 JASPAR yes 27527564
chr1 25085304 25085308 YY1 TRANSFAC yes 27527565
chr1 25085305 25085320 FOXP1 JASPAR yes 27527566
Genes associated with rs550119504[chr1:25085306], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More