EnhancerDB
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  3. rs550130036[chr17:33572846]
Enhancers that have rs550130036[chr17:33572846]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 33572314 33572864 vista24529
VISTA
chr17 33572425 33583803 enh32176
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Colon (HCT116) Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs550130036[chr17:33572846]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 33572070 33572901 POLR2A UCSC Txn Factor no Conserved 108251235
chr17 33572137 33573645 ZNF274 GTRD no Bone Marrow (K562) 108251237
chr17 33572247 33573155 ZNF143 GTRD no Epithelial (MCF-7) 21751035
chr17 33572247 33573155 ZNF143 GTRD no Epithelial (MCF-7) 108251245
chr17 33572327 33573037 ZNF143 GTRD no Epithelial (MCF-7) 21751038
chr17 33572327 33573037 ZNF143 GTRD no Epithelial (MCF-7) 108251251
chr17 33572340 33573026 ZNF274 GTRD no Bone Marrow (K562) 108251253
chr17 33572387 33573094 ZNF143 GTRD no Epithelial (MCF-7) 21751039
chr17 33572387 33573094 ZNF143 GTRD no Epithelial (MCF-7) 108251254
chr17 33572398 33573156 ZNF274 GTRD no Bone Marrow (K562) 108251255
chr17 33572401 33572913 ZBTB33 GTRD no Lung (A549) 108251256
chr17 33572407 33573176 ZBTB33 GTRD no Lung (A549) 108251257
chr17 33572410 33573124 ZBTB33 GTRD no Brain (SK-N-SH) 108251258
chr17 33572443 33573030 ZBTB33 GTRD no Lung (A549) 108251260
chr17 33572451 33572992 ZNF143 GTRD no Epithelial (MCF-7) 21751041
chr17 33572451 33572992 ZNF143 GTRD no Epithelial (MCF-7) 108251261
chr17 33572459 33573057 ZNF274 GTRD no Cervix (HeLa-S3) 21751042
chr17 33572459 33573057 ZNF274 GTRD no Cervix (HeLa-S3) 108251262
chr17 33572472 33573131 ZNF274 GTRD no Liver (HepG2) 108251263
chr17 33572483 33572997 ZNF143 GTRD no Epithelial (MCF-7) 21751043
chr17 33572483 33572997 ZNF143 GTRD no Epithelial (MCF-7) 108251264
chr17 33572493 33573029 ZNF274 GTRD no Blood (GM12878) 108251265
chr17 33572543 33572929 ZNF143 GTRD no Epithelial (MCF-7) 21751045
chr17 33572543 33572929 ZNF143 GTRD no Epithelial (MCF-7) 108251267
chr17 33572546 33572973 ZNF143 GTRD no Epithelial (MCF-7) 21751046
chr17 33572546 33572973 ZNF143 GTRD no Epithelial (MCF-7) 108251268
chr17 33572548 33572967 ZNF143 GTRD no Epithelial (MCF-7) 21751047
chr17 33572548 33572967 ZNF143 GTRD no Epithelial (MCF-7) 108251269
chr17 33572554 33572999 ZNF274 GTRD no Bone Marrow (K562) 108251270
chr17 33572563 33573012 ZBTB33 GTRD no Brain (SK-N-SH) 108251271
chr17 33572567 33572903 ZNF143 GTRD no Epithelial (MCF-7) 21751048
chr17 33572567 33572903 ZNF143 GTRD no Epithelial (MCF-7) 108251272
chr17 33572569 33572990 ZNF143 GTRD no Epithelial (MCF-7) 21751049
chr17 33572569 33572990 ZNF143 GTRD no Epithelial (MCF-7) 108251273
chr17 33572582 33572955 ZNF274 GTRD no Liver (HepG2) 108251274
chr17 33572583 33573045 ZNF143 GTRD no Epithelial (MCF-7) 21751050
chr17 33572583 33573045 ZNF143 GTRD no Epithelial (MCF-7) 108251275
chr17 33572584 33572959 ZNF143 GTRD no Epithelial (MCF-7) 21751051
chr17 33572584 33572959 ZNF143 GTRD no Epithelial (MCF-7) 108251276
chr17 33572589 33573176 ZNF274 GTRD no Blood (GM12878) 108251277
chr17 33572646 33572854 ZNF274 GTRD no Blood (GM12878) 108251278
chr17 33572656 33572946 ZNF274 GTRD no Blood (GM12878) 108251279
chr17 33572665 33573006 ZNF274 GTRD no Liver (HepG2) 108251280
chr17 33572681 33572963 SOX2 GTRD no Neural Stem Cells (H9) 108251281
chr17 33572707 33572958 ZBTB33 GTRD no Brain (SK-N-SH) 108251282
chr17 33572836 33572848 BHLHE23 JASPAR yes 21225228
chr17 33572836 33572848 BHLHE23 JASPAR yes 53997567
chr17 33572837 33572847 BHLHE22 JASPAR yes 21225229
chr17 33572837 33572847 NEUROD2 JASPAR yes 21225230
chr17 33572837 33572847 NEUROG2 JASPAR yes 21225231
chr17 33572837 33572847 OLIG1 JASPAR yes 21225232
chr17 33572837 33572847 OLIG2 JASPAR yes 21225233
chr17 33572837 33572847 OLIG3 JASPAR yes 21225234
chr17 33572837 33572847 BHLHE22 JASPAR yes 53997568
chr17 33572837 33572847 NEUROD2 JASPAR yes 53997569
chr17 33572837 33572847 NEUROG2 JASPAR yes 53997570
chr17 33572837 33572847 OLIG1 JASPAR yes 53997571
chr17 33572837 33572847 OLIG2 JASPAR yes 53997572
chr17 33572837 33572847 OLIG3 JASPAR yes 53997573
chr17 33572840 33572861 IRF1 JASPAR yes 21225235
chr17 33572840 33572861 IRF1 JASPAR yes 53997574
chr17 33572845 33572860 FOXP1 JASPAR yes 21225236
chr17 33572845 33572860 FOXP1 JASPAR yes 53997575
chr17 33572845 33572866 IRF1 JASPAR yes 21225237
chr17 33572845 33572866 IRF1 JASPAR yes 53997576
chr17 33572846 33572861 FOXP1 JASPAR yes 21225238
chr17 33572846 33572861 FOXP1 JASPAR yes 53997577
Genes associated with rs550130036[chr17:33572846], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More