EnhancerDB
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  3. rs550132483[chr5:172208962]
Enhancers that have rs550132483[chr5:172208962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 172208951 172208972 vista50169
VISTA
Transcript factors that have rs550132483[chr5:172208962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172208951 172208965 RORA JASPAR yes 67825933
chr5 172208951 172208965 RORA JASPAR yes 70763129
chr5 172208959 172208963 ESR1 TRANSFAC yes 67825934
chr5 172208959 172208963 ESR1 TRANSFAC yes 70763130
Genes associated with rs550132483[chr5:172208962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More