EnhancerDB
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  3. rs550167687[chr17:80504952]
Enhancers that have rs550167687[chr17:80504952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550167687[chr17:80504952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80504942 80504953 DUX4 JASPAR yes 56373210
chr17 80504948 80504963 FOXP1 JASPAR yes 56373211
chr17 80504949 80504964 FOXP1 JASPAR yes 56373212
chr17 80504950 80504965 FOXP1 JASPAR yes 56373213
chr17 80504951 80504966 FOXP1 JASPAR yes 56373214
chr17 80504952 80504967 FOXP1 JASPAR yes 56373215
chr17 80504952 80504973 IRF1 JASPAR yes 56373216
Genes associated with rs550167687[chr17:80504952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More