EnhancerDB
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  3. rs550193398[chr1:173384993]
Enhancers that have rs550193398[chr1:173384993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs550193398[chr1:173384993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173384579 173385099 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846700
chr1 173384589 173385109 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846701
chr1 173384592 173385002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846702
chr1 173384626 173385046 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846704
chr1 173384675 173384995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846709
chr1 173384684 173385068 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846710
chr1 173384687 173385097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846711
chr1 173384701 173385041 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846714
chr1 173384701 173385081 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846715
chr1 173384710 173384996 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846717
chr1 173384713 173385043 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846719
chr1 173384728 173385018 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846720
chr1 173384756 173385192 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846725
chr1 173384757 173385027 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846726
chr1 173384760 173385356 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107846728
chr1 173384969 173385503 ZNF274 GTRD no Liver (HepG2) 21351293
chr1 173384979 173384994 FOXP1 JASPAR yes 33197413
chr1 173384992 173384998 TCF4 TRANSFAC yes 33197414
Genes associated with rs550193398[chr1:173384993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More