EnhancerDB
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  3. rs550200355[chr19:5957489]
Enhancers that have rs550200355[chr19:5957489]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550200355[chr19:5957489]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5957480 5957490 HOXA13 JASPAR yes 112248151
chr19 5957480 5957490 HOXB13 JASPAR yes 112248152
chr19 5957480 5957490 HOXD13 JASPAR yes 112248153
chr19 5957486 5957500 PAX6 JASPAR yes 112248154
Genes associated with rs550200355[chr19:5957489], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More