EnhancerDB
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  3. rs550228196[chr17:41482161]
Enhancers that have rs550228196[chr17:41482161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41479046 41498765 enh17167
Brain (SK-N-MC) Astrocyte Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550228196[chr17:41482161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41482154 41482164 SP1 JASPAR yes 54342544
chr17 41482154 41482173 PAX5 JASPAR yes 54342545
chr17 41482157 41482162 SP1 TRANSFAC yes 54342546
Genes associated with rs550228196[chr17:41482161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More