EnhancerDB
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  3. rs550290375[chr17:2100047]
Enhancers that have rs550290375[chr17:2100047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550290375[chr17:2100047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2100041 2100048 SP1 TRANSFAC yes 52735477
chr17 2100041 2100050 SP1 TRANSFAC yes 52735478
chr17 2100044 2100053 HIC2 JASPAR yes 52735479
chr17 2100045 2100061 ZNF143 JASPAR yes 52735480
chr17 2100047 2100051 LFA1 TRANSFAC yes 52735481
chr17 2100047 2100067 TP63 JASPAR yes 52735482
Genes associated with rs550290375[chr17:2100047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More