EnhancerDB
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  3. rs550309401[chr5:79541608]
Enhancers that have rs550309401[chr5:79541608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs550309401[chr5:79541608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79541602 79541617 MEF2A JASPAR yes 63712177
chr5 79541603 79541618 MEF2C JASPAR yes 63712178
chr5 79541604 79541616 MEF2A JASPAR yes 63712179
chr5 79541604 79541616 MEF2B JASPAR yes 63712180
chr5 79541604 79541616 MEF2D JASPAR yes 63712181
chr5 79541606 79541610 YY1 TRANSFAC yes 63712182
Genes associated with rs550309401[chr5:79541608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More