EnhancerDB
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  3. rs550317818[chr10:32041006]
Enhancers that have rs550317818[chr10:32041006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 32032398 32053515 enh1162
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550317818[chr10:32041006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 32040987 32041007 RREB1 JASPAR yes 126493814
chr10 32040994 32041014 TBX19 JASPAR yes 126493815
chr10 32040996 32041012 T JASPAR yes 126493816
chr10 32041003 32041013 TBX21 JASPAR yes 126493817
chr10 32041003 32041014 TBX2 JASPAR yes 126493818
chr10 32041003 32041016 EOMES JASPAR yes 126493819
chr10 32041004 32041012 MGA JASPAR yes 126493820
chr10 32041004 32041012 TBX15 JASPAR yes 126493821
chr10 32041004 32041012 TBX1 JASPAR yes 126493822
chr10 32041004 32041012 TBX4 JASPAR yes 126493823
chr10 32041004 32041012 TBX5 JASPAR yes 126493824
chr10 32041004 32041014 TBR1 JASPAR yes 126493825
Genes associated with rs550317818[chr10:32041006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More