EnhancerDB
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  3. rs550337059[chr2:232560650]
Enhancers that have rs550337059[chr2:232560650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550337059[chr2:232560650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232560636 232560650 PLAG1 JASPAR yes 81737883
chr2 232560641 232560653 PKNOX1 JASPAR yes 81737884
chr2 232560641 232560653 TGIF1 JASPAR yes 81737885
chr2 232560644 232560657 NR2F1 JASPAR yes 81737886
chr2 232560648 232560652 ESR1 TRANSFAC yes 81737887
Genes associated with rs550337059[chr2:232560650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More