EnhancerDB
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  3. rs550380642[chr17:48976129]
Enhancers that have rs550380642[chr17:48976129]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550380642[chr17:48976129]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48975718 48976273 ZNF274 GTRD no Liver (HepG2) 21770578
chr17 48975905 48976151 ZNF274 GTRD no Liver (HepG2) 21770579
chr17 48975918 48976166 ZNF274 GTRD no Bone Marrow (K562) 21770580
chr17 48975969 48976214 ZNF274 GTRD no Cervix (HeLa-S3) 21770581
chr17 48976123 48976129 GATA3 JASPAR yes 54730718
chr17 48976125 48976140 MEF2C JASPAR yes 54730719
chr17 48976126 48976141 MEF2A JASPAR yes 54730720
chr17 48976129 48976143 FOXF2 JASPAR yes 54730721
chr17 48976129 48976143 ONECUT2 JASPAR yes 54730722
chr17 48976129 48976143 ONECUT3 JASPAR yes 54730723
chr17 48976129 48976144 FOXP1 JASPAR yes 54730724
Genes associated with rs550380642[chr17:48976129], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More