EnhancerDB
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  3. rs550406163[chr6:30746821]
Enhancers that have rs550406163[chr6:30746821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 30746716 30747579 vista51541
VISTA
Transcript factors that have rs550406163[chr6:30746821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30746810 30746823 NFKB1 JASPAR yes 70344451
chr6 30746810 30746823 NFKB1 JASPAR yes 101048214
chr6 30746816 30746830 NR2F1 JASPAR yes 70344453
chr6 30746816 30746830 NR2F1 JASPAR yes 101048216
chr6 30746821 30746834 NR2F1 JASPAR yes 70344454
chr6 30746821 30746834 NR2F1 JASPAR yes 101048217
Genes associated with rs550406163[chr6:30746821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More