EnhancerDB
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  3. rs550411011[chr1:23441968]
Enhancers that have rs550411011[chr1:23441968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs550411011[chr1:23441968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23441952 23441968 POU4F2 JASPAR yes 27414099
chr1 23441952 23441968 POU4F3 JASPAR yes 27414100
chr1 23441954 23441968 POU4F1 JASPAR yes 27414102
chr1 23441954 23441969 HNF1A JASPAR yes 27414103
chr1 23441955 23441968 HNF1B JASPAR yes 27414104
chr1 23441955 23441969 POU4F1 JASPAR yes 27414105
chr1 23441955 23441971 POU4F2 JASPAR yes 27414106
chr1 23441955 23441971 POU4F3 JASPAR yes 27414107
chr1 23441956 23441968 FOXC2 JASPAR yes 27414108
chr1 23441956 23441972 POU4F2 JASPAR yes 27414109
chr1 23441956 23441972 POU4F3 JASPAR yes 27414110
chr1 23441958 23441972 POU4F1 JASPAR yes 27414111
chr1 23441958 23441973 HNF1A JASPAR yes 27414112
chr1 23441959 23441972 HNF1B JASPAR yes 27414113
chr1 23441959 23441973 POU4F1 JASPAR yes 27414114
chr1 23441959 23441975 POU4F2 JASPAR yes 27414115
chr1 23441959 23441975 POU4F3 JASPAR yes 27414116
chr1 23441961 23441975 ONECUT1 JASPAR yes 27414117
chr1 23441961 23441975 ONECUT2 JASPAR yes 27414118
chr1 23441961 23441975 ONECUT3 JASPAR yes 27414119
chr1 23441964 23441974 CUX2 JASPAR yes 27414120
chr1 23441964 23441974 PAX3 JASPAR yes 27414121
chr1 23441964 23441974 PAX7 JASPAR yes 27414122
Genes associated with rs550411011[chr1:23441968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More