EnhancerDB
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  3. rs550473998[chr1:204264315]
Enhancers that have rs550473998[chr1:204264315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204261217 204266185 vista127
VISTA
Transcript factors that have rs550473998[chr1:204264315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204264303 204264318 HNF1A JASPAR yes 34689677
chr1 204264303 204264318 HNF1A JASPAR yes 71155664
chr1 204264304 204264317 HNF1B JASPAR yes 34689678
chr1 204264304 204264317 HNF1B JASPAR yes 71155665
Genes associated with rs550473998[chr1:204264315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More