EnhancerDB
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  3. rs550492854[chr11:12462389]
Enhancers that have rs550492854[chr11:12462389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs550492854[chr11:12462389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12462388 12462399 FLI1 JASPAR yes 37446931
chr11 12462389 12462400 ELF5 JASPAR yes 37446932
chr11 12462389 12462402 ELF1 JASPAR yes 37446933
chr11 12462389 12462403 SPI1 JASPAR yes 37446934
chr11 12462389 12462403 SPIC JASPAR yes 37446935
Genes associated with rs550492854[chr11:12462389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More