EnhancerDB
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  3. rs550512597[chr2:70343090]
Enhancers that have rs550512597[chr2:70343090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 70342945 70343256 vista31999
VISTA
Transcript factors that have rs550512597[chr2:70343090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70342931 70343356 RELA UCSC Txn Factor no Conserved 108432934
chr2 70343074 70343095 REST JASPAR yes 22080433
chr2 70343074 70343095 REST JASPAR yes 74896538
chr2 70343077 70343091 NR2F1 JASPAR yes 22080434
chr2 70343077 70343091 NR2F1 JASPAR yes 74896539
chr2 70343077 70343097 TP53 JASPAR yes 22080435
chr2 70343077 70343097 TP53 JASPAR yes 74896540
chr2 70343090 70343109 CTCF JASPAR yes 22080436
chr2 70343090 70343109 CTCF JASPAR yes 74896541
Genes associated with rs550512597[chr2:70343090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More