EnhancerDB
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  3. rs550544694[chr1:27986073]
Enhancers that have rs550544694[chr1:27986073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550544694[chr1:27986073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802613
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802614
chr1 27985066 27986616 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802615
chr1 27986070 27986073 MYB TRANSFAC yes 27719739
chr1 27986073 27986082 SNAI2 JASPAR yes 27719740
chr1 27986073 27986083 ID4 JASPAR yes 27719741
chr1 27986073 27986083 TCF3 JASPAR yes 27719742
chr1 27986073 27986083 TCF4 JASPAR yes 27719743
Genes associated with rs550544694[chr1:27986073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More