EnhancerDB
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  3. rs550601642[chr13:113371920]
Enhancers that have rs550601642[chr13:113371920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550601642[chr13:113371920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113371909 113371923 IRF7 JASPAR yes 60429473
chr13 113371915 113371925 HOXB13 JASPAR yes 60429475
chr13 113371919 113371923 YY1 TRANSFAC yes 60429476
chr13 113371919 113371932 POU3F3 JASPAR yes 60429477
Genes associated with rs550601642[chr13:113371920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More