EnhancerDB
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  3. rs550610579[chr1:226848873]
Enhancers that have rs550610579[chr1:226848873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550610579[chr1:226848873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226848866 226848877 FLI1 JASPAR yes 35829147
chr1 226848866 226848879 ELF3 JASPAR yes 35829148
chr1 226848867 226848878 ELF5 JASPAR yes 35829149
chr1 226848867 226848879 EHF JASPAR yes 35829150
chr1 226848867 226848879 ELF1 JASPAR yes 35829151
chr1 226848867 226848880 ELF1 JASPAR yes 35829152
Genes associated with rs550610579[chr1:226848873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More