EnhancerDB
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  3. rs550610964[chr1:10118354]
Enhancers that have rs550610964[chr1:10118354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550610964[chr1:10118354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10118338 10118356 IRF2 JASPAR yes 26697950
chr1 10118340 10118361 IRF1 JASPAR yes 26697951
chr1 10118341 10118355 PAX6 JASPAR yes 26697952
Genes associated with rs550610964[chr1:10118354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More