EnhancerDB
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  3. rs550625154[chr6:30812111]
Enhancers that have rs550625154[chr6:30812111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550625154[chr6:30812111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30811813 30812253 TEAD4 UCSC Txn Factor no Conserved 108539563
chr6 30811857 30812153 GATA3 UCSC Txn Factor no Conserved 108539564
chr6 30811895 30812205 NR3C1 UCSC Txn Factor no Conserved 108539565
chr6 30812101 30812113 NHLH1 JASPAR yes 101058484
chr6 30812101 30812114 ZBTB18 JASPAR yes 101058485
chr6 30812102 30812112 NHLH1 JASPAR yes 101058486
Genes associated with rs550625154[chr6:30812111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More