EnhancerDB
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  3. rs550682864[chr6:30817248]
Enhancers that have rs550682864[chr6:30817248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550682864[chr6:30817248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30817237 30817249 GRHL1 JASPAR yes 101059403
chr6 30817243 30817259 RFX5 JASPAR yes 101059404
chr6 30817247 30817253 TCF4 TRANSFAC yes 101059405
Genes associated with rs550682864[chr6:30817248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More