EnhancerDB
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  3. rs550683217[chr6:30771857]
Enhancers that have rs550683217[chr6:30771857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550683217[chr6:30771857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30771842 30771857 MEF2C JASPAR yes 101052458
chr6 30771843 30771858 MEF2A JASPAR yes 101052459
chr6 30771846 30771860 FOXF2 JASPAR yes 101052462
chr6 30771846 30771860 ONECUT3 JASPAR yes 101052463
chr6 30771846 30771861 FOXP1 JASPAR yes 101052464
chr6 30771847 30771858 FOXA1 JASPAR yes 101052465
chr6 30771847 30771862 FOXA1 JASPAR yes 101052466
chr6 30771848 30771859 FOXB1 JASPAR yes 101052467
chr6 30771848 30771859 FOXC1 JASPAR yes 101052468
chr6 30771848 30771860 FOXC2 JASPAR yes 101052469
chr6 30771849 30771861 FOXI1 JASPAR yes 101052470
chr6 30771850 30771864 ONECUT2 JASPAR yes 101052471
chr6 30771850 30771864 ONECUT3 JASPAR yes 101052472
chr6 30771850 30771865 FOXP1 JASPAR yes 101052473
chr6 30771850 30771865 HNF1A JASPAR yes 101052474
chr6 30771851 30771865 POU4F1 JASPAR yes 101052475
chr6 30771851 30771866 FOXA1 JASPAR yes 101052476
chr6 30771851 30771867 POU4F2 JASPAR yes 101052477
chr6 30771851 30771867 POU4F3 JASPAR yes 101052478
chr6 30771852 30771863 FOXB1 JASPAR yes 101052479
chr6 30771852 30771863 FOXC1 JASPAR yes 101052480
chr6 30771852 30771863 PROP1 JASPAR yes 101052481
chr6 30771852 30771864 FOXC2 JASPAR yes 101052482
chr6 30771853 30771865 FOXI1 JASPAR yes 101052483
chr6 30771854 30771868 ONECUT2 JASPAR yes 101052484
chr6 30771854 30771868 ONECUT3 JASPAR yes 101052485
chr6 30771854 30771869 FOXP1 JASPAR yes 101052486
chr6 30771854 30771869 HNF1A JASPAR yes 101052487
chr6 30771855 30771869 POU4F1 JASPAR yes 101052488
chr6 30771855 30771870 FOXA1 JASPAR yes 101052489
chr6 30771855 30771871 POU4F2 JASPAR yes 101052490
chr6 30771855 30771871 POU4F3 JASPAR yes 101052491
chr6 30771856 30771867 FOXB1 JASPAR yes 101052492
chr6 30771856 30771867 FOXC1 JASPAR yes 101052493
chr6 30771856 30771867 PROP1 JASPAR yes 101052494
chr6 30771856 30771868 FOXC2 JASPAR yes 101052495
chr6 30771857 30771869 FOXI1 JASPAR yes 101052496
Genes associated with rs550683217[chr6:30771857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More