EnhancerDB
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  3. rs550693660[chr6:16669637]
Enhancers that have rs550693660[chr6:16669637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 16669504 16669854 vista51161
VISTA
Transcript factors that have rs550693660[chr6:16669637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16669522 16669745 RUNX3 UCSC Txn Factor no Conserved 108538893
chr6 16669634 16669639 SP1 TRANSFAC yes 70326410
chr6 16669634 16669639 SP1 TRANSFAC yes 100324603
chr6 16669635 16669650 NR2C2 JASPAR yes 70326411
chr6 16669635 16669650 NR2C2 JASPAR yes 100324604
Genes associated with rs550693660[chr6:16669637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More