EnhancerDB
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  3. rs550728569[chr2:240212500]
Enhancers that have rs550728569[chr2:240212500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550728569[chr2:240212500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240212485 240212506 REST JASPAR yes 82226762
chr2 240212492 240212502 MZF1 JASPAR yes 82226764
chr2 240212495 240212500 TFAP2A TRANSFAC yes 82226765
chr2 240212495 240212501 MZF1 JASPAR yes 82226766
chr2 240212497 240212503 MAZ TRANSFAC yes 82226767
Genes associated with rs550728569[chr2:240212500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More