EnhancerDB
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  3. rs550754013[chr2:38667551]
Enhancers that have rs550754013[chr2:38667551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs550754013[chr2:38667551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38667537 38667554 RARA JASPAR yes 73140961
chr2 38667537 38667554 RXRA JASPAR yes 73140962
chr2 38667544 38667554 RORA JASPAR yes 73140964
chr2 38667545 38667556 ESRRA JASPAR yes 73140965
chr2 38667545 38667556 ESRRB JASPAR yes 73140966
chr2 38667545 38667558 NR2F1 JASPAR yes 73140967
chr2 38667547 38667555 NR4A2 JASPAR yes 73140968
chr2 38667549 38667553 ESR1 TRANSFAC yes 73140969
Genes associated with rs550754013[chr2:38667551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More