EnhancerDB
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  3. rs550778688[chr6:11361702]
Enhancers that have rs550778688[chr6:11361702]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11352354 11376815 enh23022
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Esophagus Astrocyte Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs550778688[chr6:11361702]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11361688 11361703 NR2C2 JASPAR yes 99879234
chr6 11361689 11361703 RXRB JASPAR yes 99879235
chr6 11361689 11361703 RXRG JASPAR yes 99879236
chr6 11361695 11361710 NR2C2 JASPAR yes 99879237
chr6 11361697 11361707 SP1 JASPAR yes 99879238
chr6 11361698 11361702 LFA1 TRANSFAC yes 99879239
Genes associated with rs550778688[chr6:11361702], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More