EnhancerDB
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  3. rs550812529[chr11:62264788]
Enhancers that have rs550812529[chr11:62264788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs550812529[chr11:62264788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62264429 62265025 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21488792
chr11 62264429 62265025 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107974455
chr11 62264522 62265026 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488793
chr11 62264522 62265026 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974456
chr11 62264552 62265170 CTCF UCSC Txn Factor no Conserved 107974457
chr11 62264558 62264938 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21488794
chr11 62264558 62264938 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107974458
chr11 62264572 62264968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488795
chr11 62264572 62264968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974459
chr11 62264573 62265089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488796
chr11 62264573 62265089 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974460
chr11 62264574 62265104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488797
chr11 62264574 62265104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974461
chr11 62264580 62264940 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107974462
chr11 62264729 62265085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488798
chr11 62264729 62265085 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974463
chr11 62264777 62265293 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21488799
chr11 62264777 62265293 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107974464
chr11 62264787 62264801 TLX1 JASPAR yes 39208830
Genes associated with rs550812529[chr11:62264788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More