EnhancerDB
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  3. rs550864776[chr1:234622445]
Enhancers that have rs550864776[chr1:234622445]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550864776[chr1:234622445]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234621224 234622475 ZBTB33 GTRD no Brain (SK-N-SH) 21393114
chr1 234621406 234622513 ZBTB33 GTRD no Brain (SK-N-SH) 21393116
chr1 234621496 234622517 ZBTB33 GTRD no Brain (SK-N-SH) 21393118
chr1 234621499 234622573 ZBTB33 GTRD no Brain (SK-N-SH) 21393119
chr1 234621520 234622467 ZBTB33 GTRD no Brain (SK-N-SH) 21393121
chr1 234621534 234622460 ZBTB33 GTRD no Brain (SK-N-SH) 21393123
chr1 234621553 234622518 ZBTB33 GTRD no Brain (SK-N-SH) 21393124
chr1 234622445 234622461 RFX4 JASPAR yes 36277516
Genes associated with rs550864776[chr1:234622445], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More