EnhancerDB
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  3. rs550899665[chr12:52373020]
Enhancers that have rs550899665[chr12:52373020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52362566 52373215 enh14724
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs550899665[chr12:52373020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52373009 52373023 PLAG1 JASPAR yes 120912262
chr12 52373016 52373021 SP1 TRANSFAC yes 120912263
chr12 52373017 52373022 SP1 TRANSFAC yes 120912264
Genes associated with rs550899665[chr12:52373020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More