EnhancerDB
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  3. rs550918228[chr17:43396181]
Enhancers that have rs550918228[chr17:43396181]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs550918228[chr17:43396181]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43395706 43396914 ZNF274 GTRD no Bone Marrow (K562) 21765036
chr17 43395851 43396261 ZNF274 GTRD no Bone Marrow (K562) 21765037
chr17 43395870 43396685 ZNF274 GTRD no Bone Marrow (K562) 21765038
chr17 43395939 43396182 ZNF274 GTRD no Bone Marrow (K562) 21765039
chr17 43395940 43396287 ZNF274 GTRD no Liver (HepG2) 21765040
chr17 43396003 43396404 ZNF274 GTRD no Blood (GM12878) 21765041
chr17 43396011 43396846 ZNF274 GTRD no Bone Marrow (K562) 21765042
chr17 43396099 43396615 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21765043
chr17 43396119 43396649 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21765044
chr17 43396171 43396182 E2F1 JASPAR yes 54444089
chr17 43396171 43396183 E2F1 JASPAR yes 54444090
chr17 43396174 43396186 ZBTB7A JASPAR yes 54444091
chr17 43396175 43396187 GLI2 JASPAR yes 54444092
chr17 43396175 43396187 ZBTB7C JASPAR yes 54444093
Genes associated with rs550918228[chr17:43396181], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More