EnhancerDB
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  3. rs550935981[chr1:16125373]
Enhancers that have rs550935981[chr1:16125373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550935981[chr1:16125373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16125156 16125857 TCF7L2 GTRD no Colon (HCT116) 107802198
chr1 16125360 16125380 TP63 JASPAR yes 27002749
chr1 16125365 16125376 FOSL2 JASPAR yes 27002750
chr1 16125366 16125377 NFE2 JASPAR yes 27002751
Genes associated with rs550935981[chr1:16125373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More