EnhancerDB
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  3. rs550953549[chr10:21642386]
Enhancers that have rs550953549[chr10:21642386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs550953549[chr10:21642386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21642375 21642390 NFYB JASPAR yes 125900371
chr10 21642377 21642390 DUXA JASPAR yes 125900372
chr10 21642378 21642389 DUX4 JASPAR yes 125900373
chr10 21642382 21642386 H1TF2 TRANSFAC yes 125900374
chr10 21642382 21642386 NFE TRANSFAC yes 125900375
chr10 21642382 21642386 SRF TRANSFAC yes 125900376
Genes associated with rs550953549[chr10:21642386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More