EnhancerDB
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  3. rs551085426[chr6:11223734]
Enhancers that have rs551085426[chr6:11223734]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551085426[chr6:11223734]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11223714 11223735 IRF1 JASPAR yes 99866392
chr6 11223722 11223742 RREB1 JASPAR yes 99866395
chr6 11223725 11223737 FOXC2 JASPAR yes 99866396
chr6 11223726 11223746 RREB1 JASPAR yes 99866397
chr6 11223727 11223747 RREB1 JASPAR yes 99866398
chr6 11223728 11223743 FOXP1 JASPAR yes 99866399
chr6 11223730 11223750 RREB1 JASPAR yes 99866400
Genes associated with rs551085426[chr6:11223734], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More