EnhancerDB
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  3. rs551097258[chr1:1779827]
Enhancers that have rs551097258[chr1:1779827]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1770710 1799155 enh6
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551097258[chr1:1779827]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1779808 1779829 IRF1 JASPAR yes 26206389
chr1 1779810 1779831 IRF1 JASPAR yes 26206391
chr1 1779814 1779829 PRDM1 JASPAR yes 26206393
chr1 1779816 1779831 FOXP1 JASPAR yes 26206394
chr1 1779816 1779837 IRF1 JASPAR yes 26206395
chr1 1779820 1779835 STAT2 JASPAR yes 26206396
chr1 1779821 1779833 IRF1 JASPAR yes 26206397
chr1 1779821 1779842 IRF1 JASPAR yes 26206398
chr1 1779822 1779843 IRF1 JASPAR yes 26206399
chr1 1779824 1779838 IRF7 JASPAR yes 26206400
chr1 1779827 1779848 IRF1 JASPAR yes 26206401
Genes associated with rs551097258[chr1:1779827], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More