EnhancerDB
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  3. rs551130900[chr17:42180516]
Enhancers that have rs551130900[chr17:42180516]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551130900[chr17:42180516]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42180504 42180519 TFAP2C JASPAR yes 54387528
chr17 42180506 42180518 TFAP2A JASPAR yes 54387529
chr17 42180506 42180518 TFAP2B JASPAR yes 54387530
chr17 42180506 42180518 TFAP2C JASPAR yes 54387531
chr17 42180506 42180521 TFAP2A JASPAR yes 54387532
chr17 42180506 42180521 TFAP2C JASPAR yes 54387533
chr17 42180507 42180518 TFAP2A JASPAR yes 54387534
chr17 42180507 42180518 TFAP2B JASPAR yes 54387535
Genes associated with rs551130900[chr17:42180516], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More