EnhancerDB
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  3. rs551187792[chr1:19717665]
Enhancers that have rs551187792[chr1:19717665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551187792[chr1:19717665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19717657 19717668 YY2 JASPAR yes 27184345
chr1 19717659 19717671 TAL1 JASPAR yes 27184346
chr1 19717660 19717672 BHLHE23 JASPAR yes 27184347
chr1 19717661 19717671 BHLHE22 JASPAR yes 27184348
chr1 19717661 19717671 NEUROD2 JASPAR yes 27184349
chr1 19717661 19717671 NEUROG2 JASPAR yes 27184350
chr1 19717661 19717671 OLIG1 JASPAR yes 27184351
chr1 19717661 19717671 OLIG2 JASPAR yes 27184352
chr1 19717661 19717671 OLIG3 JASPAR yes 27184353
chr1 19717661 19717673 TAL1 JASPAR yes 27184354
chr1 19717664 19717685 IRF1 JASPAR yes 27184355
Genes associated with rs551187792[chr1:19717665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More